Consed

eagle-i ID

Resource Type

Properties

1. Resource Description

   "Consed/Autofinish is a tool for viewing, editing, and finishing sequence assemblies created with phrap. Finishing capabilities include allowing the user to pick primers and templates, suggesting additional sequencing reactions to perform, and facilitating checking the accuracy of the assembly using digest and forward/reverse pair information."

2. Manufacturer

   CodonCode Corporation

3. Used by

   DNA Sequence Analysis Shared Resource

4. Operating System

   Berkeley Software Distribution (BSD) Unix

5. Operating System

   HP-Compaq Tru64 UNIX

6. Operating System

   Hewlett-Packard HP-UX

7. Operating System

   IBM AIX

8. Operating System

   Linux

9. Operating System

   Mac OS X

10. Operating System

    Microsoft Windows

11. Operating System

    Oracle Solaris

12. Operating System

    Silicon Graphics IRIX

13. Data Input

    DNA sequence data

14. Software purpose

    Sequence alignment objective

15. Related Publication or Documentation

    Consed: a graphical tool for sequence finishing.

16. Website(s)

    http://bozeman.mbt.washington.edu/consed/consed.html

17. Website(s)

    http://www.phrap.org/phredphrapconsed.html

18. Related Technique

    Sequencing

19. Software license

    Open source software license