Algorithmic software component
algorithmic software component
SAMTools
http://samtools.sourceforge.net/
Website(s)
has URL
has_url
"SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence alignments. SAM aims to be a format that: is flexible enough to store all the alignment information generated by various alignment programs; is simple enough to be easily generated by alignment programs or converted from existing alignment formats; is compact in file size; allows most of operations on the alignment to work on a stream without loading the whole alignment into memory; allows the file to be indexed by genomic position to efficiently retrieve all reads aligning to a locus."
Resource Description
resource_description
Software purpose
Sequence alignment objective
achieves objective
achieves_objective
sequence alignment objective
Used by
used by
used_by
Massively Parallel Sequencing Shared Resource
Related Technique
Sequencing
related technique
sequencing assay
related_technique
sequencing assay
Massively Parallel Signature Sequencing
massively parallel signature sequencing
2013-04-17T12:49:59.605-05:00
shoffmann (Scott Hoffmann)
2013-04-17T12:52:48.827-05:00
workflow state
Published
shoffmann (Scott Hoffmann)
Software
software
software
material_entity
independent_continuant
continuant
entity